RobEdwards

SSH Keys

Stacks and Queues 3 Using arrays to write stacks and queues

Heaps 1 Introduction and Tree levels

BLAST 2 seed and extend

Java 5 Autoboxing

XML

Overlap layout consensus sequence assembly approach

Sorts 5 Shell Sort

Perl part 3: Perl functions and commands

LinkedList 6 removeFirst()

ABACBS Presentation 2020

LinkedList 7 removeLast()

Red Black Trees 2 Example of building a tree

Assignment 3

Sanger sequencing

Perl part 5: Subroutines and Modules

Hashes 17 resize

SQL Data Types

Count Min Sketch

LinkedList 4 addFirst()

Sorts 8 Quick Sort

Hashes 5 Compressing numbers to fit the size of the array

Definitions

Greedy Assembly of DNA Sequences

illumina paired end sequencing

Ion Torrent Sequencing

Java 2 ComparableGenerics

Sorts 3 Insertion Sort

Introduction on counting k-mers

Heaps 5 HeapSort

Antibiotics 3 Role of HGT in antibiotic resistance

Sorts 6 Merge Sort

Java 3 Introduction to Generic Programming

Java 4 Parameterized Types

Bloom Filters

Counting k-mers with Bloom filters

Java 6 Exceptions

Sorts 7 Merge Sort Code

BLAST 5 BLOSUM62

Perl part 1: Introduction to Perl

Hashes 3 Collisions

LinkedList 8 remove and find

Sorts 11 Radix Sort

LinkedList 13 Circular Linked Lists

Trees 2 Complete and Full

Metagenome Binning

Sorts 9 Quick Sort Worst Case

Why does paired end sequencing help assembly?

Perl part 7: Introduction to the Perl DBI

Pacific Biosciences Sequencing