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Modeling missing loops of protein structure using Modeller interface in UCSF ChimeraX
Extract Protein Sequences (FASTA) from PDB Files Using UCSF ChimeraX: A Step-by-Step Tutorial
Concatenating DCD Files into a Single DCD File with VMD | Easy Tcl Script Tutorial
VMD tutorials : NAMD Plot Plugin
ChimeraX tutorials [editing and cleaning PDB files]
How to mutate a protein in UCSF Chimera?
How to calculate the net charge of a system with VMD?
How to install UCSF Chimera in Ubuntu (Linux) ?
NAMD : FATAL ERROR: ABNORMAL EOF FOUND - buffer=*END*
MDAnalysis tutorial: Extract/Save atomic information as data arrays from/to PDB files (B_factors)
Understanding Resolution values of Structures in Protein Data Bank
Movie Making from molecular dynamics simulation with VMD
Loading trajectory files (DCD files ) in VMD
VMD data analysis automatization (part1): Load, wrap, align, and calculate RMSD of trajectory
TCL Tutorials : Declaring variables in TCL ( Set command) | 3 minutes
Introduction to TCL Scripting in VMD part2 (write your first script from scratch)
Python for computational chemistry - Lists
Python for computational chemistry -For Loops
MDtraj Tutorials- (2) Load, slice, align,combine,and save MDs trajectories
How to install VMD in Ubuntu (Linux) ?