Pybrain: MRI analysis in Python using Nipype, Nilearn and more
Michael Notter and Peer Heerholz' workshop on Nipype, recorded 9-10 November, 2020.
Workshop materials and notebooks: https://github.com/miykael/workshop_p...
00:00:00 Introduction
00:06:25 Recap on Python, Jupyter notebooks
00:31:43 Explore MRI data with Nibabel and Nilearn
00:58:00 Conda and Docker
01:28:37 Functional connectivity and machine learning
02:09:38 Innovations in neuroimaging tools 1
02:27:30 Q&A
02:43:56 Introduction to Nipype
02:58:05 Nipype showcase
03:26:39 Exploration of Nipype's building blocks
03:37:02 Creating a Nipype pipeline from A-Z
03:55:46 Q&A
04:05:08 PyBIDS and statistical analysis of fMRI data with Nilearn
04:27:43 Multivariate pattern analysis using searchlight and deep learning
04:57:49 Q&A
05:02:14 Innovations in neuroimaging tools 2
05:34:11 Q&A
For more on the python for brain imaging (pybrain) workshop series, see https://pybrain-workshop.github.io/