ShortClips | Count the number of snps and indels in a vcf file using bcftools

Опубликовано: 21 Октябрь 2024
на канале: Bioinformatics for Beginners
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#DataScience #Bioinformatics #Linux #variants

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Full tutorial
   • bcftools view | bcftools tutorial on ...  

Download the example data here
https://github.com/vappiah/vcf-file-m...
bcftools manual page
https://samtools.github.io/bcftools/b...
1000 genome project ftp site
http://ftp.1000genomes.ebi.ac.uk/vol1...
Install bcftools using anaconda
   • Install BCFTOOLS in Linux using anaco...  
Install bcftools by building from source:
   • How to install BCFTOOLS in any Linux ...  

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