De Novo And Reference Based Genome Assembly
Genome Assembly: De Novo And Reference Based
Mohammad Mobashir presented a detailed overview of genome assembly methods, comparing denovo and reference-based approaches, which are crucial for analyses like RNA sequencing and whole genome sequencing. The presentation covered the steps, definitions of key terms such (e.g., contigs, scaffolds, N50), and challenges associated with both methods, emphasizing the role of current Next-Generation Sequencing platforms like Illumina and Oxford Nanopore. Mohammad Mobashir also discussed technical aspects such as coverage and sequencing techniques like paired end and mate pair, and highlighted major data resources like ensemble Biomart and NCBI databases, while concluding with a decision workflow and future trends in genome assembly.
'Next Generation Sequencing NGS Introduction'
de novo genome assembly
AI genome assembly
machine learning genomics
deep learning assembly
genome reconstruction
draft genome assembly
long-read sequencing
short-read assembly
contig scaffolding
overlap-layout-consensus
graph-based assembly
de Bruijn graph
hybrid genome assembly
metagenome assembly
bioinformatics pipeline
NGS assembly workflow
genomic algorithm
high-throughput sequencing
computational genomics
genomics visualization
reference-based assembly
AI genomic alignment
sequence mapping
read alignment pipeline
variant calling workflow
reference genome mapping
AI in bioinformatics
SNP/indel detection
whole-genome alignment
NGS mapping workflow
genome annotation
machine learning in genomics
alignment algorithms
BWA Bowtie mapping
reference-guided assembly
bioinformatics AI tools
genomic data analysis
high-throughput mapping
computational biology
genomics pipeline illustration
#science #bioinformatics #Coding #codingforbeginners #matlab #programming #datascience #education #interview #podcast #viralvideo #viralshort #viralshorts #viralreels #bpsc #neet #neet2025 #cuet #cuetexam #upsc #herbal #herbalmedicine #herbalremedies #ayurveda #ayurvedic #ayush #education #physics #popular #chemistry #biology #medicine #europe #asia #australia #bioinformatics #education #educational #educationalvideos #viralvideo #technology #techsujeet #vescent #biotechnology #biotech #research #video #coding #freecodecamp #comedy #comedyfilms #comedyshorts #comedyfilms #entertainment #patna #delhi #hyderabad #bangladesh #lahore #islam #islamabad #peshawar #kabul #afghanistan #kualalumpur #malaysia #malayalam #china #saudiarabia #dubai #istanbul #turkey #dhaka #nepal #videos #education #biology #biologyclass12 #biologynotes #video #AI #ArtificialIntelligence #MachineLearning #dataanlysis #datascience #Music #Live #CoverSong #DanceChallenge #Remix #genome #genomesequencing #genomics
@BansalBiologyAvantika
@MLTeducationpoint
@YUKTAMPHYSICSONLINECLASSES
@3blue1brown
@veritasium @Bioinformagician
@drjyotibala @elimudigitalmedia @QuantaScienceChannel @OMGenomics @bioinformaticscoach @abmgood @r.hnetwork @DirtyMedicine @novapbs @DonaldLab @MyEasyStatistics @LukeyBThePhysicsG @domainofscience @TheRoyalInstitution @isbsci @alonlab9733 @umasschan @systemsbiology @officialinsideus @NAMANDEEPKAUR-t6o @shomusbiologyofficial @ApnaCollegeOfficial @khanacademymedicine @genomicsgurus @bioinformaticsdotca @statquest @KieCodes @Computerphile @KimiaLabMayo @GateSmashers @iit @argonautcode @omicslogic @animatedbiologywitharpan @infinitecodes_ @programmingwithmosh @codebasics @Socratica @Bozemanscience1 @edurekaIN @freecodecamp