Open SkyrimSE local files on steam
go up to steamapps/compatdata/489830/pfx/drive_c/steamuser/
local settings/application data/skyrim special edition
copy this full path
Open Vortex local files on Lutris, go to drive_c/users/yourname/local settings/application data/
rename the skyrim special edition folder to _old (or delete it, but you will have to re-enable your plugins)
ln - "pathtofolder" "Skyrim Special Edition"
with "pathtofolder" being the path copied earlier, surrounded by quotes
e.g. "/home/hayden/............../Application Data/Skyrim Special Edition"
copy the .txt files from the old folder to the new one, or re-enable your mods to create the new files
That should let plugin files load properly, have fun!
If you run in to issues, feel free to join my discord server:
/ discord