Using Software in CCR's HPC Environments
This presentation covers how to find and use software on CCR's HPC clusters. This also provides basic information on installing your own software.
PowerPoint presentation can be found here:
https://buffalo.box.com/s/zzkkdhci4fc...
If you're not a UB user, please contact CCR Help to get access to the slides.
0:00 Agenda
00:46 CCR Serves All Decanal Units At UB
01:38 Research Groups Have Different Software
01:56 Software: The Challenge
04:03 Software Environments
06:25 Supported Compiler Toolchains
07:28 Managing Software Across Different Resources
08:06 EasyBuild
09:27 Lmod Module System
10:20 PATH
11:48 Locating Software Modules
13:40 Hierarchical Modules
15:30 CCR Supported Architectures
16:29 Using Software Modules (Matlab)
18:09 Live Demonstration
26:50 Using Modules In Job Script
27:34 Software Build Requests
29:57 Software Installation By The User
30:42 Linux Hierarchical File System (Challenge)
32:12 Example (Samtools)
35:52 Module File EasyBuild Usage
38:14 Building Software With EasyBuild
42:30 Links For EasyBuild
47:30 Explanation for No EasyBuild Recipe
49:18 Resources