Integrate Docker into your Snakemake pipeline (with one line of code!)
Integrate Docker and Smakemake using just one line of code!
00:00 Introduction
00:25 $docker pull image
01:00 -v $(pwd):$(pwd) -w $(pwd)
03:48 Docker + Snakemake + R markdown
05:45 Why -v $(pwd):$(pwd) -w $(pwd)?
Script generated with the assistance of OpenAI's ChatGPT.