Convert between PLINK to VCF file formats (Remake)
In this #tutorial, we show how to convert between #VCF and #PLINK file formats for the entire data set, or one individual at a time. Both data formats are very popular, for SNP data analysis, so to know how to change from PLINK to VCF, and vice-versa comes in handy indeed.
When you work with VCF files, also consider the reference allele status, as this is often required for follow-up analyses.
Video contents:
00:00 - Intro
00:41 - PLINK to VCF and back (no reference considered!)
05:22 - Options to consider reference alleles
08:28 - Output files for single individuals
12:29 - Background info on the remake
Thumbnail image source: https://www.pexels.com/photo/white-co...