Bowtie tutorial || beginner ||
------------------------------- Follow Transcriptome analysis pipeline ------------------------
------ Watch Download fastq(raw file-SRA) file from NCBI
• SRA tool kit || installation to SRA file d...
• SRA to fastq file conversion || SRA toolki...
------ Watch Fastq file quality check
• Fastp | Install | Run | Paired end #bioinf...
------ Watch fastq to Bam file generation
• Bowtie2 | Install | Build Index | Alignmen...
------ Watch the SAM to BAM file sort by Samtool
• Samtools | Install | SAM to BAM conversion...
------ Watch BAM file to Count matrix generation
• Featurecount | Install | BAM to Count matr...
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