Setup a High Content Screening Imaging Platform with Label Studio
Having a platform for annotating image data is essential for High Content Screening Data. Here I will demonstrate annotating C Elegans images from the Broad BioImage Benchmark Collection.
Special thanks to the Broad Institute and the Broad Institute BioImage Benchmark Collection! The dataset I used is - https://data.broadinstitute.org/bbbc/....
The blog post includes instructions for downloading the data and configuring LabelStudio - https://www.dabbleofdevops.com/blog/s...
The annotation platform I used is called LabelStudio - https://labelstud.io/
If you have any questions or would like to find out more about my services please don't hesitate to contact me directly at [email protected] or visit my website at https://www.dabbleofdevops.com.
Citation
"We used the C.elegans infection live/dead image set version 1 provided by Fred Ausubel and available from the Broad Bioimage Benchmark Collection [Ljosa et al., Nature Methods, 2012]."